@Wannop - copy n paste the following one line at at time to fix your issue.
~/scripts/remount-rw.sh
rm /usr/lib/pd/bin/pd
ln -s /usr/bin/pd /usr/lib/pd/bin/pd
~/scripts/remount-ro.sh
there still will be two entries, either will work.
there were two entires before, these were not installed by PD49, as ive checked the package list , and also the date/times confirm they were from the original install.
(I don’t have the time to clean up these now)
Ive fixed this and the previous issue and uploaded to patchstorage.com